Browse of TCMCG066C03255 protein

CDS

Accession Number	TCMCG066C03255
gbkey	CDS
Protein Id	XP_034568970.1
Location	complement(join(34634594..34635014,34635263..34635756,34636244..34636955,34637178..34637248,34637331..34637395,34637559..34640706,34640784..34640846,34642372..34642440,34642620..34642655,34643424..34643462,34643588..34643709,34643808..34643876,34643994..34644129,34644377..34644426,34644506..34644648,34644732..34644820,34644930..34645010,34645188..34645295,34645423..34645503,34645740..34645799))
Gene	LOC117833521
GeneID	117833521
Organism	Setaria viridis

Protein

Length	2018aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA633601
db_source	XM_034713079.1
Definition	protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	helicase superfamily c-terminal domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K11320        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000228        [VIEW IN EMBL-EBI] GO:0000785        [VIEW IN EMBL-EBI] GO:0000790        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005618        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006952        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009607        [VIEW IN EMBL-EBI] GO:0009617        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0010038        [VIEW IN EMBL-EBI] GO:0016514        [VIEW IN EMBL-EBI] GO:0030312        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042742        [VIEW IN EMBL-EBI] GO:0043207        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044427        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044454        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046686        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051707        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070603        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0098542        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1904949        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCATCAAAAGGTCCTCGGTCAAAACTAGACCATGAGACAAGAGCTAGGCGTCAGAAGGCTCTTGAAGCCCCAAGGGAGCCTCGACGGCCAAAAGTTCACTGGGACCATGTCCTTGCTGAGATGGTGTGGCTGGCAAAGGAGTTTGATTCTGAGAGAAAATGGAAGTTGTCCATGGCAAAAAAGATTGCTCAAAGAGCCAACAAGAGCATAGTTGACCAAGCAACAAAGGGCGAGCGAAAACAGAAGGAGGAGGAACATAGAATGAGAAAAGTCGCACTTAATATTTCCAAGGATGTGAAGAAGTTCTGGATCAAAATAGAAAAGCTGGTTGTCTATAAGCATCAACTGGAGCTTGAGGAGAGGAAGAAAAAGGCCCTTGATAAACAACTTGATTTCCTTTTAGGTCAGACTGAGAGGTATTCGACAATGTTGGCGGAAAACCTTGTGGACATGCCGTATCCCCAGAAACTAGAAAATGGAACTTTGCAGACAAATCAATCATCACAGACTGAGGAGGTTGCAGAAGAGAACGAAAATGCAGCAATACCTGATGATCCTGATAACATGGAAGTGGACGGTGATTATGAGAGCTCCTTGGATGAAGAGCCTGAAGATGATGAGCACACAATTGATGAGGATGAAGCTCAGATCACTGAAGCTGAGCGCAACGAAGAATTAGCTGCTTTACAGGCAGAAGCTGACCTACCACTGGATGATATTCTCAAAATGTATACAGAAACCAAAGTTAGCAGGGAAAGCAGTCCAGACAGCAAAGACATGTTAAGTAACTTAGGCTCGAAGAATTTGATTGTAGATTCTTCGAACCAGGCCAATGGCTGCGATCATGATACTGCTCACTCTTCAAGTGACGATGGCAATTCTTCTGAGGAAGAAGACGATGGCCATTCTTATGCTGAATTTGTTAAGAAGAATCATGGAAAAAGTAATGGCAACATCTCTTCTATAGATGAGCAGGAAGACAAAGATTATGTTGCTGCTGATGAAGGAAAGGATGATGAAGCAACTTTGTCTGAAGAGGAAGAGTTAGCAAAGAAAGAAGTTCCTGATCATCTGGAAGAGATTAAGTTATTGCAAAAGGAGAGCGAGATACCACTAGAAGAACTTCTTGCGATGTACCAGAAGGATGGCTATGCAGATCATGAAACAACGGAGTTGGAGAATTCACCCTGTATTGTTGAAGAGACTAATACTGACATGTCGTTGGATGATCAATCTGCAAAGATTCTTGAAGTGAACAGTGATACAGTTGTGGGTCACCTATCTGCGGATGTGATGAAAACTGAGCATAATGTGACTGCTAATTCTATGCAATCAGAAATAGTACCAGAGCCTTGCGCACAACAGAATTTTGTGGAAGAGAATAATCTCGCTGATGTTAACACGGTCAATGGAGATAAAAGTGACGATGTAATTGCTGATGCTGCAGCTGCTGCCAGATCAGCACAACCAACTGGTAACACCTTCTTGACAACAAATGTGCGCACGAAATTCCCATTCCTTCTTAAGCATTCGCTTCGCGAATACCAGCATATAGGGTTGGATTGGTTGGTTGCAATGTATGAGCAGAGGCTTAATGGAATTCTAGCAGATGAAATGGGTCTAGGCAAGACAATCATGACTATCTCCTTGCTTGCACATCTTGCATGTGAGAAGGGGATATGGGGTCCTCATCTTATCGTTGTGCCAACTAGTGTTATGCTAAACTGGGAGACTGAATTTCTCAAGTGGTGTCCTGCTTTTAAAATATTGACTTACTTTGGAAGTGCAAAGGAGAGAAAGCAAAAGCGTCAGGGCTGGATGAAACCAAATTACTTCCATGTTTGCATCACAACATACAGGCTTGTCATCCAGGACTCTAAAGTGTTTAAGCGAAAAAAGTGGAAGTATCTTATTCTTGATGAGGCTCATCTGATAAAGAACTGGAAATCACAGCGATGGCAGACTTTACTTAATTTTAATTCAAAACGACGCATTCTTTTGACTGGAACTCCGCTGCAAAATGACCTCATGGAACTTTGGTCCCTGATGCACTTTCTGATGCCTCATGTATTTCAGTCTCACCAGGAGTTCAAGGATTGGTTCTGCAATCCAATTTCAGGAATGGTGGAGGGCCAAGATAAAGTAAATAAAGAAGTCATAGATCGATTGCACAATGTCCTTCGTCCATTTATACTGCGGCGGCTGAAAAGAGATGTCGAGAAACAGTTACCAAAGAAGCACGAGCATGTCATATATTGCCGACTTTCTAGAAGACAAAGGAATTTGTATGAAGATTTTATTGCTAGCTCAGAGACACAAACAACACTAGCAAGTGGGAATTATTTTGGCATGATAAGTATCATTATGCAACTTAGAAAGGTCTGTAACCACCCAGATCTTTTTGAAGGTCGCCCAATAATAAGCTCATTTGACATGGCTGGGATTAACATGCATCTCAGCTATTCAGTATGCATGCTCCTTGATAAGAATCCGTTTTCTCATGTGGACCTATCTGATATGAATCTTGTGTTTACTCAAAATGAATTTGGCATGAGTTCCTGGGAAGCTGACGAGGTGGTTGCTGCTTTTCCTCCAAGTATCACCTCCCGGGACTCTCAGCTGGATATATCCTGCTCGAAAAAGGATCATCAGGGGAGTAATGTAACAAATATTTTTGAAGATATTCAGAAAGCCCTACAGGATGAGAGAATAAAGGAATCCAAAGAAAGGGCAGCTTCCATTGCATGGTGGAATAGGTTACGATGTGAAAAGAGGCCTGTCTATGGCACAAATATGAGAGAGGTTTTGACTGTAAAGCATCCTGTATCTGATATTCTTGAGAAGAGGAACAACCCTTTGTGCCACATGGATTATTCATCGAGCCTAGCAGACCTTGTTCTTCCATCAGTGGAACGGTTTCAGAAACTGCTTGATATTGTGGAATCATTTACATTTGCAATTCCTGCTGCTCGAGCTCCTCCCCCTGTTTGCTGGTGCAGCAAAGGGAAGTCTCCTGTTTTTATTGATCCGGCATATAGAGAAAAATGCACGAATGAGTTTTCCCCCATTCTGTCTCCTATAAGGTCTGCTATTGTTCGCCGCCAAGTTTACTTTCCTGATAGGCGTTTGATCCAGTTTGATTGTGGCAAGTTGCAGGAACTTGCCATTCTGCTGAGGCGTTTGAAGTCAGAAGGGCACAGAGCCTTGATATTTACTCAGATGACTAAGATGCTTGATGTCTTGGAAGAGTTCATAAATTTATATGGGTATACATATTTACGTTTAGATGGTTCTACACCGCCAGAAGAGAGGCAGACCCTCATGCAGAGGTTCAATACAAATCCAAAGTTTTTCCTTTTCATTTTGTCTACTCGTAGTGGTGGTGTGGGAATCAACCTAGTAGGTGCGGACACTGTCATATTCTATGACAGTGACTGGAACCCTGCAATGGACCAACAGGCACAGGACAGATGTCACAGGATTGGTCAGACTCGTGAAGTTCACATATATAGACTCATTAGTGAAAGCACTATAGAGGAGAACATTCTGAAGAAAGCGAATCAGAAACGAGCTCTTGATGATCTAGTGATACAGCGAGGTAGCTACAATACAGAGTTTTTCAAGAAGCTCGATCCTATGGAGTTCTTTTCTGGGCACACGTCTCTTCGTGTGGAAGACCAGCAGAAGGACTGCTCTATGACTGCCGGATCTTCAAATGATGCGGATGTGGGGTTGTCAAATGCAGATGTTGAAGCGGCTATTAGACAAGCAGAAGATGAAGCTGACTATATGGCTCTCAAGAAGCTAGAGCAGGAAGAAGCCGTGGACAATCAAGAGTTCAGCGAGGAGGCTGCTGGTAGACCAGAGGATGATGATTTGGTAAATGAGGAGGATGCAAGACACGATGAACACATTATCGAAGAACATAGATATAACTCTTCGGATATGGAGAAGGAGAAGAATGCTGCTTTGTCCAATCAATTAAATGAAGAAAAGGCTCTTACATTGGCTGTTGGTGATGAAGATACAGACATGCTTGCTGATGTGAAACAGATGGCTGCCGCCGCAGCTGCTGCAGGACAAGCAAGTTCGTCCTTCGAAAACCAGCTCCGGCCAATTGATAGATATGCAATGCGCTTTATGGAACTCTGGGATCCAGTAATTGACAAAGCTGCTATAAATCGTCAAGTAAATGTTGAAGAGGAAGAATGGGAGCTCGATCGCATTGAAAAACTCAAAGAGGATTTAGAAGCAGAAATTGATGAAGACCAGGAACCGCTTTCTTATGAATCCTGGGATGTTGATTTTGCTACGACAGCCTATCGCCAACATGTTGAGGCTTTAACTCAAAAGCAGTTGTTGGAAGAACAGGAAAAACAGGCTCGGGAAGCTGCAAAAGAGTTGGAGGAGAAAAATGATAATATGAGCGCTCACCGTAGAAAGTCAAAAAAGAACAAAAAGAAGACCGGCAAGTTCAAGTCCCTGAAAAGAGGACGTTTGTCATCTGAATCAGAAGTCATACTGGAGGAAACTTCTGTAGATACAATGAGCATTGATGACAATGCACCCTCACCTGAACTCATAAGTGATGAATCACCTCGCCATTATTCTAACAAGCGTAAGAAGATTATGTCTGCTACTGAAGAAGAAAACAGTAACAGAAGTTTGAAGAAGTTCAAGAAAGCCACTAAATCAAGTAGTGCCTCAGAAGCCTTGTCACCTAGGCACTTGAGGGAAGAGTTTAATGATTCAGATCCAAAATCGGCAGCTAGAACTAAGAGTGATGGCAGAATTTCCATCCCTTGCATGTCAGTAAAACGTGTTATTGTAATAAAACCTGAGAGGCTGAAAAAGAAGGGAATATGGTCTCGTGATTGTGCTTCAGACTCATGGACATCTGAGGAGGATGCGGTTCTTTGCGGAACTGTGCATGAGTATGGTCCTCTTTGGGAACTGGCAAGTGATTTTCTTCATTCCTTACCAGGTGGTGCTTTTTATAGGGGAAAATATCGTCATCCAGTGCATTGCTGTGAGAGATACCGAGAACTATTCTGCAAACATGCAATGTCAGCAACAGATAATTCTAACAGTGAAAAGGTTCCTTCTGGGACTGGAAAGGCTATACTGAGAGTATCTGAGGATCAAGCTCAGATGTTGGTGAATGTGACCAGTGAACTTCCTAACAATGAGTTGCTTCTCCAGAAACACTTCATGGCTGTACTTTCATCTGTCTGGAGATCAAAATGCCGGCGTGATCCCCGGCGTGTTATAAGTACTTACTCTAGTGCACTACGCATGCTTTCTCCTGTGAAAAATCCTGCTGGATCAAGTGCGAACTGGTCCATGGTAAACTTTAGACCAAGCTTCAATCTAGTTAGGACAGCCCTTGCAGATGCTCAGGCTCAATCTACACAAATTGTGATTCCGCCACCGATGAGAAATCAAGAATACTGCCGGAATCATTTAGAATTAGAATTGGATTTCTTGACAGATCAGCATCATTATGAAGAGGACTTCCCATCTATAGTAAATGTGTCCATACTAGAACCAGAACCAATCAAACAGGCTGTGGAGCCAGTGGAACAATCACTATTGTCTGGACTTTCTTGTAGACAAGCTGAGACCAGACTCAGAATGGCATCAGAAGCTTGTTATGAAGGTGAAGGTTCTCATTGGGCATCATCAGCTTTCCACATAAATGATGCCACCCGGCATAAATCTGGGCCAAAGTCCATAGGAAAGCACAAAGCAGCATCAGAATGTGGAAGACCTCCCAAATCAAAAATCCAGAAGATTACTGAATCGCATCAGGAAGGGCCAAGTACCTCGAGTAATTTTCTTCGGATGCCTGGTCAACTTTTCCCAGGTGCAGCTGACTTCCACATTAGCGAGTCCCTATCTGACTTTGGTATCAGCGATTCTGAATTCAACTACTCCGAGGATCTCTGGCAAGAGGTTGACTACAACGAGTTCCTCCTGGACCAGGATGACTCTGGTCTCCTTCCTGGTATTGAGGAGTTAGAACCTCTTTCAGATTTCACAGATATTGGATGA

Protein:   MASKGPRSKLDHETRARRQKALEAPREPRRPKVHWDHVLAEMVWLAKEFDSERKWKLSMAKKIAQRANKSIVDQATKGERKQKEEEHRMRKVALNISKDVKKFWIKIEKLVVYKHQLELEERKKKALDKQLDFLLGQTERYSTMLAENLVDMPYPQKLENGTLQTNQSSQTEEVAEENENAAIPDDPDNMEVDGDYESSLDEEPEDDEHTIDEDEAQITEAERNEELAALQAEADLPLDDILKMYTETKVSRESSPDSKDMLSNLGSKNLIVDSSNQANGCDHDTAHSSSDDGNSSEEEDDGHSYAEFVKKNHGKSNGNISSIDEQEDKDYVAADEGKDDEATLSEEEELAKKEVPDHLEEIKLLQKESEIPLEELLAMYQKDGYADHETTELENSPCIVEETNTDMSLDDQSAKILEVNSDTVVGHLSADVMKTEHNVTANSMQSEIVPEPCAQQNFVEENNLADVNTVNGDKSDDVIADAAAAARSAQPTGNTFLTTNVRTKFPFLLKHSLREYQHIGLDWLVAMYEQRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPKKHEHVIYCRLSRRQRNLYEDFIASSETQTTLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMHLSYSVCMLLDKNPFSHVDLSDMNLVFTQNEFGMSSWEADEVVAAFPPSITSRDSQLDISCSKKDHQGSNVTNIFEDIQKALQDERIKESKERAASIAWWNRLRCEKRPVYGTNMREVLTVKHPVSDILEKRNNPLCHMDYSSSLADLVLPSVERFQKLLDIVESFTFAIPAARAPPPVCWCSKGKSPVFIDPAYREKCTNEFSPILSPIRSAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDVLEEFINLYGYTYLRLDGSTPPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHTSLRVEDQQKDCSMTAGSSNDADVGLSNADVEAAIRQAEDEADYMALKKLEQEEAVDNQEFSEEAAGRPEDDDLVNEEDARHDEHIIEEHRYNSSDMEKEKNAALSNQLNEEKALTLAVGDEDTDMLADVKQMAAAAAAAGQASSSFENQLRPIDRYAMRFMELWDPVIDKAAINRQVNVEEEEWELDRIEKLKEDLEAEIDEDQEPLSYESWDVDFATTAYRQHVEALTQKQLLEEQEKQAREAAKELEEKNDNMSAHRRKSKKNKKKTGKFKSLKRGRLSSESEVILEETSVDTMSIDDNAPSPELISDESPRHYSNKRKKIMSATEEENSNRSLKKFKKATKSSSASEALSPRHLREEFNDSDPKSAARTKSDGRISIPCMSVKRVIVIKPERLKKKGIWSRDCASDSWTSEEDAVLCGTVHEYGPLWELASDFLHSLPGGAFYRGKYRHPVHCCERYRELFCKHAMSATDNSNSEKVPSGTGKAILRVSEDQAQMLVNVTSELPNNELLLQKHFMAVLSSVWRSKCRRDPRRVISTYSSALRMLSPVKNPAGSSANWSMVNFRPSFNLVRTALADAQAQSTQIVIPPPMRNQEYCRNHLELELDFLTDQHHYEEDFPSIVNVSILEPEPIKQAVEPVEQSLLSGLSCRQAETRLRMASEACYEGEGSHWASSAFHINDATRHKSGPKSIGKHKAASECGRPPKSKIQKITESHQEGPSTSSNFLRMPGQLFPGAADFHISESLSDFGISDSEFNYSEDLWQEVDYNEFLLDQDDSGLLPGIEELEPLSDFTDIG